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67 Possible Causes for dalgarno

  • Staphylococcus Aureus

    We showed that base pairing between the 3'-UTR and the Shine-Dalgarno (SD) region of icaR mRNA interferes with the translation initiation complex and generates a double-stranded[ncbi.nlm.nih.gov] The resulting complex is composed of an imperfect duplex masking the Shine-Dalgarno sequence of coa mRNA and of a loop-loop interaction occurring downstream in the coding[ncbi.nlm.nih.gov] In vivo relevance of the interaction between the 3′-UTR and the Shine-Dalgarno region of icaR mRNA.[doi.org]

  • Enterococcus

    By swapping the 5′ and 3′ halves of the two RNA molecules, we identified the 5′ half of the mRNA(MF) spanning the Shine–Dalgarno sequence AGGAGG as an essential element for[pnas.org] The similarity of the putative consensus for efficient RelQ inhibition, GGAGG, identified by our mutational analysis and the Shine–Dalgarno sequence AGGAGG suggests the possibility[pnas.org]

  • Streptococcus Pyogenes

    The third tab shows the information on putative Shine-Dalgarno sequences found upstream the genes.[journals.plos.org] […] translation of leaderless mRNAs was described depending on environmental conditions such as low temperature [ 52 ] or stress conditions inducing the release of the anti-Shine-Dalgarno[bmcgenomics.biomedcentral.com] Models of Shine-Dalgarno sites were calculated using the MEME (as a most significantly overrepresented 6–8 bp long motifs in regions 4–16 bp upstream of the each phage genes[journals.plos.org]

  • Escherichia Coli

    Increased translation is unlikely to be the mechanism, because translation efficiency is normally dictated by the context of the Shine-Dalgarno (SD) sequence or codon usage[mbio.asm.org]

  • Pseudomonas

    Potential ORFs of LKA1 were identified based on gene prediction tools, tBLAST homology searches, and visual inspection of potential ORFs and their Shine-Dalgarno sequence.[doi.org]

  • Pseudomonas Aeruginosa

    RegTransBase ( Kazakov et al. 2007 ), and the Pseudomonas Genome Database (PGD) ( Winsor et al. 2016 ) to map putative promoters, transcription factor binding sites, Shine-Dalgarno[academic.oup.com] […] position of putative intergenic elements including core promoters, transcription factor binding sites, transcriptional terminators, invert repeats, small RNAs (sRNAs) and Shine-Dalgarno[academic.oup.com]

  • Scarlet Fever

    Both a promoter and a ribosome binding site (Shine-Dalgarno sequence) are present upstream of the gene.[en.wikipedia.org]

  • Bone Metastasis

    ., Dalgarno, D. C. & Sawyer, T. K. Targeting protein kinases for bone disease: discovery and development of Src inhibitors. Curr. Pharm. Des. 8, 2049–2075 (2002). 50.[doi.org]

  • Streptococcus Agalactiae

    […] translation of leaderless mRNAs was described depending on environmental conditions such as low temperature [ 52 ] or stress conditions inducing the release of the anti-Shine-Dalgarno[bmcgenomics.biomedcentral.com]

  • Chondrosarcoma

    Zakareya Gamie, Konstantinos Kapriniotis, Dimitra Papanikolaou, Emma Haagensen, Ricardo Da Conceicao Ribeiro, Kenneth Dalgarno, Anja Krippner-Heidenreich, Craig Gerrand, Eleftherios[doi.org]

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